# Publications

## Refereed Journal Publications

- P. Justin Rossi, ..., K. Oweiss, et al. (2016) “The Third Annual Deep Brain Stimulation Think Tank: A Review of Emerging Issues and Technologies”,
*Frontiers in Neuroscience,*Vol 10, doi: 10.3389/fnins.2016.00034 - K. Oweiss, I Badreldin, (invited review) (2015) “Neuroplasticity subserving the operation of Brain machine Interfaces,”
*Journal of Neurobiology of Disease* - S. Eldawlatly, K. Oweiss, (2014) “Temporal precision in population - but not individual neuron - dynamics reveals rapid experience-dependent plasticity in the rat barrel cortex”
*Frontiers in Computational Neuroscience,*Vol 8, doi: 10.3389/fncom.2014.00155 - A. Eleryan, M. Vaidya, J. Southerland, I. Badreldin, K. Balasubramanian, A. Fagg, N. Hatsopoulos, and K. Oweiss (2014) “Tracking Single Units in Chronic Recordings in the Macaque Motor Cortex for Brain Machine Interface Applications”,
*Frontiers in Neural Engineering*7:23. doi:10.3389/fneng.2014.00023 - I. Badreldin, K. Oweiss, (2014) “Neural Decoding”, in
*Springer Encyclopedia of Computational Neuroscience*(Dieter Jaeger & Ranu Jung, Eds), Springer Verlag - M Aghagolzadeh, A Mohebi, K. Oweiss (2014), Sorting and tracking neuronal spikes via simple thresholding,” IEEE Transactions on Neural Systems and Rehabilitation Engineering, 22:4, pp 858 - 869
- A. Mohebi, K. Oweiss, (2013) “A fully automated rodent conditioning protocol for sensorimotor integration and cognitive control experiments,”
*Journal of Visualized Experiments* - J. Daly, J. Liu, M. Aghagolzadeh, K. Oweiss (2012), “Optimal Space Time Precoding of Artificial Sensory Feedback through Mutichannel Microstimulation in Bi-directional Brain Machine Interfaces “
*J. of Neural Engineering*, 9, 065004, doi:10.1088/1741-2560/9/6/065004 - F. Zhang, M. Aghagolzadeh, and K. Oweiss, (2012) “A Fully Implantable, Programmable and Multimodal Neuroprocessor for Wireless, Cortically Controlled Brain-Machine Interface Applications,”
*Journal of Signal Processing Systems*, pp. 1-11, doi:10.1007/s11265-012-0670 - K.Y. Kwon, S. Eldawlatly, K. Oweiss (2012)“NeuroQuest: A Comprehensive Analysis Tool for Extracellular Neural Ensemble Recordings,”
*Journal of Neuroscience Methods 204, 189– 201* - S. Eldawlatly, K. Oweiss (2011) “Millisecond-Timescale Local Network Coding in the Rat Primary Somatosensory Cortex,”
*PLoS ONE*6(6): e21649. doi:10.1371/journal.pone.0021649 - J. Liu, H. Khalil, K. Oweiss (2011)“Neural Feedback for Instantaneous Spatiotemporal Modulation of Afferent Pathways in Bi-directional Brain Machine Interfaces,”
*IEEE Transactions on Neural Systems & Rehabilitation Engineering,*19:5, pp 521-533, doi: 10.1109/TNSRE.2011.2162003 - J. Liu, H. Khalil, K. Oweiss (2011)“Model-based analysis and control of a network of Basal Ganglia spiking neurons in the normal and Parkinsonian states,”
*Journal of Neural Engineering,*8: 045002 - M. Grosse-Wentrup, D. Mattia, K. Oweiss (2011), “Using Brain-Computer Interfaces to Induce Neural Plasticity and Restore Function,”
*Journal of Neural Engineering,*8:025004 - M. Aghagolzadeh, S. Eldawlatly and K. Oweiss, (2010) “Synergistic Coding by Cortical Neural Ensembles”
*IEEE Transactions on Information Theory*, 56:2, pp. 875-899 - S. Eldawlatly, Y. Zhou, R. Jin and K. Oweiss, (2010) “On The Use of Dynamic Bayesian Networks in Reconstructing Functional Neuronal Networks from Spike Train Ensembles”,
*Journal of Neural Computation*, MIT Press, 22:1, pp. 158-189 - M. Aghagolzadeh and K. Oweiss, (2009) “Compressed and Distributed Sensing of Neuronal Activity for Real Time Spike Train Decoding”,
*IEEE Transactions on Neural Systems & Rehabilitation Engineering*, 17:2, pp. 416-427 - S. Eldawlatly, R. Jin, and K. Oweiss, (2009) “Identifying Functional Connectivity in Large Scale Neural Ensemble Recordings: A Multiscale Data Mining Approach”,
*Journal of Neural Computation*, MIT Press, 21:2, pp. 450-477 - M. Kamboh, A. Mason and K. Oweiss, (2008) “Analysis of Lifting and B-Spline DWT Implementations for Implantable Neuroprosthetics,”
*Journal of Signal Processing Systems*, 52:3, pp. 249-261 - Kamboh, M. Raetz, K. Oweiss, A. Mason, (2007) “Area-Power Efficient VLSI Implementation of Multichannel DWT for Data Compression in Implantable Neuroprosthetics,”
*IEEE Transactions Biomedical Circuits and Systems*, 1:2, pp. 128-135 - K. Oweiss, A. Mason, Y. Suhail, A. Kamboh, K. Thomson (2007) “A Scalable Wavelet Transform VLSI Architecture for Real-Time Signal Processing in High Density Intra-cortical Implants,”
*IEEE Transactions on Circuits and Systems*, 54:6, pp. 1266-1278 - K. Oweiss, and D. Anderson, (2007)
*“*Tracking Signal Subspace Invariance for Blind Separation and Classification of Nonorthogonal Sources in Correlated Noise,”*EURASIP Journal on Advances in Signal Processing*, vol. 2007, Article ID 37485, 20 pages - K. Oweiss, R. Jin, Y. Suhail, (2007) “Identifying neuronal assemblies with local and global connectivity with spectral clustering in scale space”
*Journal of Neurocomputing*, 70:10-12, pp. 1728-1734 - K. Oweiss, (2006) “A Systems Approach for data compression and latency reduction in cortically-controlled brain machine interfaces,”
*IEEE Transactions on Biomedical Engineering*, 53:7, pp. 1364 – 1377 - K. Oweiss, D.J. Anderson, (2002) “Spike Sorting: A Novel Shift and Amplitude Invariant Technique,”
*Journal of Neurocomputing*, Vol 44-46, pp. 1133-1139 - K. Oweiss, D.J. Anderson, (2001) “Noise Reduction in Multichannel Neural Recording using a New Array Wavelet Denoising Algorithm,”
*Journal of Neurocomputing*, Vol. 38-40, pp. 1687-1693

## Books & Dissertations

- K. Oweiss, Editor (2010),
*Statistical Signal Processing for Neuroscience and Neurotechnology*, Academic Press, Elsevier, 1^{st}edition, ISBN-13: 978-0-12-375027-3. - K. Oweiss (2002),
*Multiresolution Analysis of**Multichannel Neural Recordings in the Context of Signal Detection, Estimation and Noise Suppression,*Ph.D. Dissertation, Univ. of Michigan, Ann Arbor

## Book Chapters

- K. Oweiss (Section Editor) (2014) “Brain Machine Interface: Overview” in
*Springer Encyclopedia of Computational Neuroscience*(Dieter Jaeger & Ranu Jung, Eds), Springer Verlag - I. Badreldin, K. Oweiss (2014) “Neural Decoding” in
*Springer Encyclopedia of Computational Neuroscience*(Dieter Jaeger & Ranu Jung, Eds), Springer Verlag - K. Oweiss, M. Aghagolzadeh (2010) “Detection and Classification of Extracellular Action Potential Recordings,” in
*Statistical Signal Processing for Neuroscience and Neurotechnology (Ch.2)**- K. Oweiss (Editor)*, Academic Press, Elsevier, pp. 13-68, ISBN: 978-0-12-375027-3 - S. Eldawlatly, K. Oweiss, (2010) “Graphical Models of Functional and Effective Neuronal Connectivity,” in
*Statistical Signal Processing for Neuroscience and Neurotechnology, (Ch. 5) - K. Oweiss*(*Editor*), Academic Press, Elsevier, pp. 119-159, ISBN: 978-0-12-375027-3 - K. Oweiss, D. J. Anderson (2006) “Spike Superposition Resolution In Multichannel Extracellular Neural Recordings: A Novel Approach,”
*in Handbook of Neural Engineering*(Ch. 22) – M. Akay, (*Editor*), Wiley-IEEE Press, pp. 369-381, ISBN: 978-0-470-05669-1

## Editorials

- K. Oweiss, (2011) “Optogenetics, Neural Ensemble Recordings and Graphical Models: Characterizing Plasticity in Neuronal Networks
*in vivo*,” in*Proc. of IEEE 35*Society^{th}Engineering & Biology - K. Oweiss, (Invited) (2011) “Brain Machine Interfaces for personalized neurological diagnostics and therapy”
*Journal of CyberTherapy and Rehabilitation*, 4:1, pp. 38 (ISSN: 1784-9934) - K. Oweiss, (2010)
*Statistical Signal Processing for Neuroscience and Neurotechnology*, Academic Press, Elsevier, 1^{st}edition, pp. 1-11, ISBN: 978-0-12-375027-3 - T. W. Berger, Z. Chen, A. Cichocki, K. Oweiss, R. Quian Quiroga, and N. V. Thakor, (2010) “Signal Processing for Neural Spike Trains,”
*Journal of Computational Intelligence and Neuroscience,*Volume 2010, Article ID 698751, 2 pages, doi:10.1155/2010/698751 - K. Oweiss, J. Principe and D. Johnson, (2009) “Statistical Signal Processing in Neuroscience”,
*EURASIP Journal on Advances in Signal Processing*, Volume 2009, Article ID 105086, 1 page, doi:10.1155/2009/105086

## Refereed Conference Papers - Published

### (i) Full publication review

- I. Badreldin, K. Oweiss, (2014), “A Design and Implementation Framework for Unsupervised High-resolution Recursive Filters in Neuromotor Prosthesis Applications,”
*Asilomar Conference on Signals, Systems, and Computers*, Pacific Grove, CA - I. Badreldin, J. Southerland, M. Vaidya, A. Eleryan, K. Balasubramanian, A. Fagg, N. Hatsopoulos, K. Oweiss, (2013) “Unsupervised Decoder Initialization for Brain-Machine Interfaces Using Neural State Space Dynamics,” IEEE Int. Conf. Neural Engineering, pp. 997-1000
- A Eleryan, M. Vaidya, I. Badreldin, J. Southerland, K. Balasubramanian, A. Fagg, N. Hatsopoulos, K. Oweiss (2013) “Tracking Chronically Recorded Single-Units in Cortically Controlled BMIs,” IEEE Int. Conf. Neural Engineering, pp. 427-430
- J. Daly, E. Purcell, M. Zoratti, K. Oweiss, (2013) “Control of Somatosensory Cortex Via Optogenetic Stimulation of Motor and Thalamic Pathways,” Transactions of Japanese Society for Medical and Biological Engineering
- J. Daly, E. Purcell, M. Zoratti, K. Oweiss, (2013) “Control of Somatosensory Cortex via Optogenetic Stimulation of Motor and Thalamic Pathways”, in
*Proc. IEEE Int. Conf. on EMBC* - K. Balasubramaniam, J. Southerland, M. Vaidya, K. Quan, A. Eleryan, A. Fagg, M. Slutzky, K. Oweiss, N. Hatsopoulos, (2013) “Operant conditioning of a multiple degree-of-freedom brain-machine interface in a primate model of amputation,” in
*Proc. IEEE Int. Conf. on EMBC* - I. Badreldin, K. Oweiss, (2012) “Performance Evaluation of Linear Brain Machine Interface Decoders in Neural State Space,” in
*Proc. of IEEE Cairo Int. Conf. on Biomedical Engineering*, pp. 10-13 - J. Liu, H. Khalil, K. Oweiss, (2011) “Model-Based Spatiotemporal Analysis and Control of a Network of Spiking Basal Ganglia Neurons” in
*Proc. IEEE Int. Conf. on Neural Engineering*, pp. 273 – 277 - M. Aghagolzadeh, K. Oweiss, (2011) “An Adaptive Wireless Communication Protocol for Neural Data Transmission in Freely Behaving Subjects” in
*Proc. IEEE Int. Conf. on Neural Engineering*, pp. 404 – 407 - F. Zhang, M. Aghagolzadeh, K. Oweiss, (2011) “A Low-Power Implantable Neuroprocessor on Nano-FPGA for Brain Machine Interface Applications” in
*Proc of**IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP)*,*pp. 1593 – 1596 - K.Y. Kwon, K. Oweiss, (2011) “Wavelet footprints for detection and sorting of extracellular neural action potentials”, in
*Proc of**IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP)*,*pp. 609 – 612 - A. M. Kamboh, Y. Yang, K. Oweiss and A. J. Mason, (2011) “Channel Characterization for Implant to Body Surface Communication,” in
*Proc IEEE International Symposium on Circuits and Systems*(ISCAS), pp. 913 – 916 - F. Zhang, M. Aghagolzadeh, K. Oweiss, (2010) “An Implantable Neuroprocessor for Multichannel Compressive Neural Recording and on-the-Fly Spike Sorting with Wireless Telemetry” in
*Proc. IEEE Biomedical Circuits and Systems**,*pp. 1-4 - J. Liu, K. Oweiss, H. Khalil, (2010) “Feedback Control of the Spatiotemporal Firing Patterns of Neural Microcircuits,” in
*Proc. of 49*(CDC), pp. 4679 – 4684^{th}IEEE Conference on Decision and Control - S. Eldawlatly and K. Oweiss, (2010) “Causal Networks Provide Functional Signature of Stimulus Encoding in the Rat Barrel Cortex”, in
*Proc. 31*^{st}IEEE Eng. in Medicine and Biology (EMBC)*,*pp. 5460 – 5463 - M. Aghagolzadeh, F. Zhang, and K. Oweiss, (2010) “An Implantable VLSI Architecture for Real Time Spike Sorting In Cortically Controlled Brain Machine Interfaces,“ in
*Proc. 31*^{st}IEEE Eng. in Medicine and Biology (EMBC)*,*pp. 1569 – 1572 - A. Kamboh, Y. Yang, K. Oweiss, A. Mason, (2010) “Design of a Configurable Neural Data Compression System for Intra-Cortical Implants,” in
*Proc. of IEEE Int. Symp. on Circuits & Systems (ISCAS)*, pp. 3473– 3476 - M. Aghagolzadeh, S. Eldawlatly, and K. Oweiss (2009) “An Information Theoretic Approach to Identify the Role of Higher-order Interactions between Cortical Neurons in Stimulus Coding “
*in Proc. 43*Pacific Grove, CA, pp. 1085-1089^{rd}Asilomar IEEE Int. Conference on Signals, Systems, and Computers, - M. Aghagolzadeh, S. Eldawlatly, and K. Oweiss, (2009) “Coding Stimulus Information with Cooperative Neural Populations,” in
*Proc. of IEEE Int. Symposium on Information Theory*, pp. 1594 – 1598 - S. Eldawlatly, Y. Zhou, R. Jin, K. Oweiss, (2009) “Inferring Functional Cortical Networks from Spike Train Ensembles using Dynamic Bayesian Networks,” in
*Proc of**IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP), pp. 3489-3492 - M. Aghagolzadeh, K. Oweiss, (2009) “Instantaneous rate estimation of Neuronal Point processes from a Compressed representation of their non-binary spike trains “ in
*Proc IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP), pp. 1593 – 1596 - A. M. Kamboh, K. Oweiss, A. Mason, (2009) "Resource Constrained VLSI Architecture for Implantable Neural Data Compression Systems,”
*Proc. of IEEE Int. Symp. On Circuits & Systems (ISCAS)*, pp. 1481 - 1484 - F. Abu-Nimeh, F. Inanlou, M. Aghagolzadeh, A. Kamboh, A. Mason, M. Ghovanloo, and K. Oweiss, (2009) “A highly modular, wireless, Implantable Interface to the Cortex,” in
*Proc. IEEE Int. Conf. on Neural Engineering*, 375 – 378 - M. Aghagolzadeh, S. Eldawlatly, K. Oweiss, (2009) “Identifying Functional Connectivity of Motor Neuronal Ensembles Improves the Performance of Population Decoders,” in
*Proc. IEEE Int. Conf. on Neural Engineering*, pp. 534 – 537 - K.Y. Kwon, S. Eldawlatly and K. Oweiss, (2009) “NeuroQuest: A Comprehensive Tool for Large Scale Neural Data Processing and Analysis” in
*Proc. IEEE Int. Conf. on Neural Engineering*, pp. 622 – 625 - F. Abu-Nimeh, M. Aghagolzadeh, K. Oweiss, (2008) “VLSI-friendly architecture for real-time spike sorting in Brain Machine Interface applications,” in
*Proc. IEEE Biomedical Circuits & Systems (BioCAS),*pp. 265-268 - M. Aghagolzadeh, M. Shetliffe, K. Oweiss, (2008) “Impact of Compressed Sensing of Motor Cortical Activity on Spike Train Decoding in Brain Machine Interfaces,” in
*Proc. 30*pp. 5302-5305^{th}IEEE Eng. in Medicine and Biology (EMBC), - S. El-Dawlatly, Y. Zhou, R. Jin and K. Oweiss, (2008) “Reconstructing Functional Neuronal Circuits using Dynamic Bayesian Networks”
*Proc. 30*pp. 5531-5534^{th}IEEE Eng. in Medicine and Biology (EMBC), - K. Oweiss, M. Shetliffe and S. Eldawaltaly (2008) “Revamping Signal Processing for Adaptive, Real Time, Bi-directional Brain Machine Interface Systems,”
*IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP), 5197-5200 - A. M. Kamboh, M. Raetz, A. Mason and K. Oweiss, (2007) “Area-Power Efficient Lifting-Based DWT Hardware for Implantable Neuroprosthetics,”
*Proc. of IEEE Int. Symposium of Circuits and Systems*(ISCAS), pp. 2371-2374 - S. El Dawlatly and K. Oweiss, (2007) “Tracking Plasticity in Probabilistic Spike Trains Models of Synaptically-Coupled Neural Population,” in
*Proc. of 3*, pp. 498-501^{rd}Int. IEEE EMBS Conf. on Neural Engineering - M. A. Shetliffe, K. Lorenz, B. Pietrzyk, and K. Oweiss, (2007) “Compressed and Distributed Sensing of Population Activity for Multiscale Decoding of Motor Cortical Response Properties,” in
*Proc. of 3*, pp. 217-220^{rd}IEEE EMBS Conf. on Neural Engineering - F. Chen, S. El-Dawlatly, R. Jin and K. Oweiss, (2007) “Identifying and Tracking the number of independent clusters of functionally interdependent neurons from biophysical models of population activity,” in
*Proc. of 3*, pp. 542-545^{rd}IEEE EMBS Conf. on Neural Engineering - A. M. Kamboh, A. Mason and K. Oweiss, (2007) “A High-Yield Area-Power Efficient DWT Hardware for Implantable Neural Interface Applications,” in
*Proc. of 3*, pp. 212-216^{rd}IEEE EMBS Conf. on Neural Engineering - K. Oweiss, (2007) “Compressed and Distributed Sensing of Multivariate Neural Point Processes,” in
*Proc. IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP), Vol. II pp. 577-580 - A. Kamboh, A. Mason, K. Oweiss, (2006) “Comparison of Lifting and B-Spline DWT Implementations for Implantable Neuroprosthetics,” in
*IEEE Sensors*, Daegu, Korea, pp 22-25 - S. Chakrabartty, A. Gore and K. Oweiss, (2006) “An adaptive multiple-input multiple-output analog-to-digital converter for high density neuroprosthetic electrode arrays”
*in**Proc. 28*, pp. 656-659^{th}IEEE Eng. in Medicine and Biology (EMBC) - K. Oweiss, R. Jin, F. Chen, (2006) “Assessing temporal and spatial evolution of clusters of functionally interdependent neurons using graph partitioning techniques,” in
*Proc. 28*, pp.1601-1604^{th}IEEE Eng. in Medicine and Biology (EMBC) - K. Oweiss, (2006) “A MIMO channel approach for characterizing electrode-tissue interface in long-term chronic microelectrode array recordings”
*in**Proc. 28*, pp.3357-3360^{th}IEEE Eng. in Medicine and Biology (EMBC) - K. Thomson and K. Oweiss, (2006) “Hardware Considerations of a Spatial Filter for Decorrelating High-density Multielectrode Neural Recordings” in
*Proc. 28*, pp. 1244-1247^{th}IEEE Eng. in Medicine and Biology (EMBC) - Y. Suhail, K. Oweiss, (2006) “Augmenting Information channels in Hearing Aids and cochlear implants under adverse conditions”,
*in Proc. of**IEEE Conf. Acoustics, Speech & Signal Processing (ICASSP)*, vol. V, pp. 889-893 - R. Jin, Y. Suhail, K. Oweiss, (2006) “A Mixture model for spike train ensemble analysis using spectral clustering,”
*in Proc.**IEEE Conf. Acoustics, Speech & Signal Processing (ICASSP)*, vol. V, pp. 885-888 - K. Oweiss, D. Anderson, (2006) “ Exploiting signal subspace invariance to resolve non-stationary, non-orthogonal sensor array signals in correlated noise fields,”
*in Proc.**IEEE Conf. Acoustics, Speech & Signal Processing (ICASSP)*, vol. IV, pp.885-888 - K. Oweiss, (2005) “Latency Reduction During Telemetry Transmission in Brain-Machine Interfaces” in
*Proc. 27*, pp. 2075-2078^{th}IEEE Eng. in Medicine and Biology (EMBC) - Y. Suhail, K. Oweiss, (2005) “Multiresolution Bayesian Detection of Multiunit Extracellular Spike Waveforms in Multichannel Neuronal Recordings,”
*in**Proc. 27*, pp.141-144^{th}IEEE Eng. in Medicine and Biology (EMBC) - K. Oweiss, A. Mason, K. Thomson, J. Li, Y. Suhail, (2005) “Augmenting Real-Time DSP in Implantable High-Density Neuroprosthetic Devices,” in
*Proc. 3*pp.108-111^{rd}IEEE- Conf. on Microtechnology in Medicine & Biology, - A. Mason, J. Li, K. Thomson, Y. Suhail, K. Oweiss, (2005) “Design Optimization of Integer Lifting DWT Circuitry for Implantable Neuroprosthetics,” in
*Proc*.*3*^{rd}IEEE- Conf. on Microtechnology in Medicine & Biology*,*pp. 112-115 - K.E. Thomson, Y. Suhail, and K. Oweiss, (2005) " A scalable architecture for streaming neural information from implantable multichannel neuroprosthetic devices,” in
*Proc. of IEEE Int. Symp. on Circuits & Systems (ISCAS)*, pp. 1342-1345 - K. Oweiss, R. Jin, Y. Suhail, (2005) “Scale-Space Processing and Clustering for Efficient Multi-Electrode Data Analysis of Large-size Neuronal Ensembles,” in
*Proc. 2*, pp.217-220^{nd}Int. IEEE Conf. on Neural Engineering - K. Oweiss, K. Thomson, D. Anderson, (2005) “A Systems Approach for Real-Time Data Compression in Advanced Brain-Machine Interfaces,” in
*Proc. 2*, pp.62-65^{nd}IEEE Conf. on Neural Engineering - Y. Suhail, and K. Oweiss, (2004) "A Reduced Complexity Integer Lifting Wavelet-Based Module for Real-Time Processing in Implantable Neural Interface Devices," in
*Proc. 26*, pp. 4552-4555^{th}IEEE Eng. in Medicine and Biology (EMBC) - K. Oweiss, (2004) “An Information Theoretic Approach for Optimizing The Analysis Of High-Density Multi-electrode Multi-unit Neuronal Recordings,” in
*Proc. 26*, pp. 4520-4523^{th}IEEE Eng. in Medicine and Biology (EMBC) - K. Oweiss, (2004) “Data Fusion in Wireless Sensor Array Networks with Signal and Noise Correlation Mismatch,”in
*Proc. of**IEEE Conf. Acoustics, Speech & Signal Processing**(ICASSP)*, II, 281-284 - D.J. Anderson, K. Oweiss, (2003) "Capturing Signal Activity and Spatial Distribution of Neurons in a Sub-Millimeter Volume,"
*Proc. of 36*, 387-391^{th }IEEE Asilomar Conf. on Signals, Systems and Computers - K. Oweiss, D.J. Anderson, and Marios M. Papaefthymiou (2003) “Optimizing Signal Coding in Neural Interface System-on-a-Chip Modules,” in
*Proc. of 25*, (I): 2016-2019^{th}IEEE Int. Conf. on Eng. in Medicine and Biology (EMBC) - K. Oweiss, (2003) “Source Detection in Correlated Multichannel Signal and Noise Fields,” in
*Proc. of IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP)*,*vol. V: 257-260 - K. Oweiss, (2003) “Spike Superposition Resolution In Multichannel Extracellular Neural Recordings: A Novel Approach,” in
*Proc. of 1*, (I): 130-133^{st}Int. IEEE Conf. on Neural Engineering - K. Oweiss, D.J. Anderson, (2002) “Independent Component Analysis of Multichannel Neural Recordings at the Micro-Scale,”in
*Proc. of the 2*^{nd}joint*IEEE**BMES-EMBC**,*(I): 2012-2013 - K. Oweiss, D.J. Anderson, (2002) “A Unified Framework for Advancing Array Signal Processing Technology of Multichannel Microprobe Neural Recording Devices,” in
*Proc of 2*(I):245-250^{nd}IEEE-EMBS Conference on Microtech. in Med. & Bio., - K. Oweiss, D.J. Anderson, (2002) “A Multiresolution Generalized Maximum Likelihood Approach for the Detection of Unknown Transient Multichannel Signals in Colored Noise with Unknown Covariance,” in
*Proc. of IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP), vol. (3): 2993-2996 - K. Oweiss, D.J. Anderson, (2001) “MASSIT- Multiresolution Analysis of Signal Subspace Invariance Techniques: A novel technique for blind source separation,” in
*Proc. of IEEE 35*^{th}*Asilomar Conf. on Signals, Systems and Computers*, (I):819-823 - K. Oweiss, D.J. Anderson, (2001) “Neural Source Localization using Advanced Sensor Array Signal Processing Techniques,” in
*Proc. of the 23*^{rd}*IEEE Eng. in Medicine and Biology (EMBC)**,*(I): 707-710 - K. Oweiss, D.J. Anderson, (2001) “A New Technique for Blind Source Separation using Subband Subspace Analysis in Correlated Multichannel Signal Environments,” in
*Proc. of IEEE Int. Conf. Acoustics, Speech & Signal Processing*(ICASSP)*, vol.*I: 2813-2816 - D.J. Anderson, K. Oweiss, and S. M. Bierer, (2001) “Sensor Arrays in the Micro-Environment of the Brain,” in
*Proc. of IEEE Int. Conf. Acoustics, Speech & Signal Processing (ICASSP),*(I): 3433-3436 - K. Oweiss, D. J. Anderson, (2000)“A New Approach to Array Denoising,” in
*Proc. IEEE 34*^{th}*Asilomar Conference on Signals, Systems and Computers*, (I): 1403-1407 - K. Oweiss, M.K. Wise, C. Lopez, J. Wiler, and D.J. Anderson, (1999) “Chronic Electrode-Brain Interface Modeled with FEM,” in
*Proc. of the 1*^{st}*Joint IEEE-EMBC & BMES*, (I):453 - K. Oweiss, O. A. Alim, (1996) "Performance evaluation of time-delay fuzzy neural networks for isolated word recognition," in
*IEEE Int. Symp. on Neuro-Fuzzy Systems*, pp: 203 - 211 - K. Oweiss, O.A. Alim, and N.E. Boghdadly, (1996) "Isolated word recognition using time-delay fuzzy neural networks," in
*SPIE 10*, Vol. 2761, No.2, pp.1511-1515^{th}Int. conf. Aerospace/Defense sensing and control

### (ii) Refereed Journal Supplements

- M. Aghagolzadeh and K. Oweiss, (2011) “Prediction of Spatiotemporal Patterns of Neural Activity Using a Higher-Order Markov Representation of Instantaneous Pairwise Maximum Entropy Model,“
*BMC Neuroscience*,12(Suppl 1):P245, doi:10.1186/1471-2202-12-S1-P245 - S. Eldawlatly, K. Oweiss, (2011), “Network dynamics associated with experience-dependent plasticity in the rat somatosensory cortex,”
*BMC Neuroscience*, 12(Suppl 1):P246, doi:10.1186/1471-2202-12-S1-P246 - A. Mohebi, J. Cardin, K. Oweiss, (2011) “A cell-type-specific dynamic Bayesian network model for spontaneous and optogenetically evoked activity in the primary visual cortex,”
*BMC Neuroscience*,12(Suppl 1):O5, doi:10.1186/1471-2202-12-S1-O5 - S. Eldawlatly, K. Oweiss, (2010), “Causal networks in the rat barrel cortex provide a signature of stimulus encoding,”
*BMC Neuroscience*, 11 (Suppl 1):O18, doi:10.1186/1471-2202-11-S1-O18 - J. Liu, K. Oweiss and H. Khalil , (2010) “Feedback control of the spatiotemporal firing pattern of a basal ganglia microcircuit model,”
*BMC Neuroscience*, 11 (Suppl 1):O16, doi:10.1186/1471-2202-11-S1-O16 - S. Eldawlatly, M. Aghagolzadeh, K. Oweiss, (2009) “Decoding spike train ensembles using the cooperative interaction between task-dependent cortical neurons”
*BMC Neuroscience*, 10 (Suppl 1):P96 doi: doi:10.1186/1471-2202-10-S1-P96 - S. Eldawlatly, Y. Zhou, R. Jin, K. Oweiss, (2008) “Inferring neuronal functional connectivity using dynamic Bayesian networks”
*BMC Neuroscience*, 9 (Suppl 1):P19 doi:10.1186/1471-2202-9-S1-P19 - M. Aghagolzadeh, K. Oweiss, (2008) “Investigating the Effect of Cortical Discharge Variability on the Accuracy of Population Decoders,”
*BMC Neuroscience*, 9 (Suppl 1):P2, doi:10.1186/1471-2202-9-S1-P2 - S. Eldawlatly, K. Oweiss, (2007) “Identifying spike-timing dependent plasticity in spike train models of synaptically-coupled neuronal ensembles,”
*BMC Neuroscience*, 8(Suppl 2): P193, doi:10.1186/1471-2202-8-S2-P193

### (iii) Abstracts & Abstract-reviewed papers

- M. Vaidya, K. Balasubramanian, J. Southerland, A. Eleryan, I. Badreldin, A. Fagg, K. Oweiss, N. Hatsopoulos "Emergence of coordinated reach-to-grasp behavior in a long-term BMI experiment," in Society for Neuroscience, Washington DC, 2014.
- E. K. Purcell, J. Daly, M. Mansy, A. Mohebi, M. Zoratti, K. Oweiss, (2013) “Optogenetic modulation of vibrissal somatosensory cortex via motor and thalamic inputs,”
*Society for Neuroscience Abstracts,*167.12/PP7 - F. Asgarian, M. Hashemi, W. Cartagena, S. Hao, K. Oweiss, (2013) “A wireless neural recording system for freely behaving primates,”
*Society for Neuroscience Abstracts,*567.06/GGG33 - S. El-Dawlatly, M. Aghagolzadeh, A. Mohebi, K. Oweiss, (2012) "Beyond single neuron responses: Networks capture ensemble coding properties and re-organization in cortex ".
*Society for Neuroscience Abstracts.*pp. 413.07 - A. Mohebi, K. Oweiss, (2012) "Ensemble dynamics underlying sensorimotor integration in the rat medial PreFrontal Cortex (mPFC) ".
*Society for Neuroscience Abstracts.*pp. 597.18. - J. Daly, A. Eleryan and K. Oweiss (2012) "JAVA Neural Circuit Simulator (JiNCS): A flexible, open-source framework for simulating networks of spiking cells with various stimulation modalities".
*Society for Neuroscience Abstracts.*pp. 712.16. - A. Tomaswick, K. Takahashi, M. Saleh, N. Hatsopoulos, K. Oweiss, (2012) "Graph model analysis of monkey arm kinematics during reach-to-grasp ".
*Society for Neuroscience Abstracts.*pp. 584.17. - A. Eleryan A. Dickey, N. Hatsopoulos, K. Oweiss, (2012) "Stability analysis of chronically recorded multiple single unit activity in the non-human primate ".
*Society for Neuroscience**Abstracts**.*pp. 277.08. - F. Asgarian Farzad , M. Kiani, M. Aghagolzadeh, A. Tomaswick, M. Ghovanloo, K. Oweiss, (2012) "A wireless implantable neural interface system for intracortical neural recording in freely behaving subjects "
*Society for Neuroscience Abstracts.*pp. 277.18 - A. Eleryan, A. Dickey, N. Hatsopoulos, K. Oweiss, (2012) "Stability Analysis of Chronically Recorded Neural Activity in the Non-Human Primate "
*Neural Interfaces Conference**Proceedings* *A.*Mohebi, J. Cardin, K. Oweiss, (2012) "A cell-type-specific population analysis of optogenetically evoked response in primary visual cortex "*Computational and Systems Neuroscience*Vol. 1. pp. 154.- A. Mohebi, K. Oweiss, (2011) “Neural ensemble correlates of working memory in the rat medial prefrontal cortex,”
*Society for Neuroscience Abstracts*, No 833.08 - A. Mohebi, J. Cardin, K. Oweiss, (2011) “A dynamic bayesian network model for up/down states of spontaneous and optogenetically evoked activity in the primary visual cortex,” No 626.21
- A. Aghagolzadeh, J. Cardin, K. Oweiss, (2011) “A graphical maximum entropy model for predicting stimulus-driven spatiotemporal spiking patterns of V1 cortical neurons,” No. 626.15
- J. Daly, J. Liu, H.Khalil, K. Oweiss, “Neural feedback for instantaneous spatiotemporal modulation of afferent pathways in bi-directional brain machine interfaces” No. 280.21, Nov 2011
- S. Eldawalty, K. Oweiss, (2011) “Inferring stimulus-specific network dynamics associated with experience-dependent plasticity in the rat somatosensory cortex following sensory deprivation,” No 74.22, Nov 2011
- S. Eldawalty, M. Aghagolzadeh & K. Oweiss, (Invited) (2011) “Probabilistic graphical models of functional and effective neuronal connectivity”
*Joint Statistical Meeting Society* - S. Eldawlatly, K. Oweiss, (2011) “Stimulus-specific neuronal circuits in the rat somatosensory cortex
*,*”*Society for Neuroscience Abstracts*, No 782.19 - J. Liu, H.Khalil, K. Oweiss, (2010) “Feedback Control of the Spatiotemporal Firing Patterns of a Basal Ganglia Microcircuit Model,”
*Society for Neuroscience Abstracts*, No 820.18 - M. Aghagolzadeh, F. Zhang, K. Oweiss, (2010) “An implantable architecture for real time unsupervised spike sorting in cortically-controlled brain machine interfaces”
*Society for Neuroscience Abstracts*, No 85.10 - S. Eldawlatly, K. Oweiss, (2010) “Causal Networks in the Rat Barrel Cortex Provide a Signature of Stimulus Encoding,”
*39*, Long Beach, CA^{th}Neural Interfaces Conference - F. Zhang, M. Aghagolzadeh, A. Kamboh, M. Kiani, A. Mason, M. Ghovanloo, and K. Oweiss, , (2010) “A Wireless and Reconfigurable Compressive Sensing System for Neural Recording in Cortical Brain Machine Interfaces,”
*39*, Long Beach, CA^{th}Neural Interfaces Conference - M. Aghagolzadeh, F. Zhang, K. Oweiss, (2010) “An Implantable VLSI Architecture for Real Time Spike Sorting,”
*39*, Long Beach, CA^{th}Neural Interfaces Conference - J. Liu, H.Khalil, K. Oweiss, (2010) “Feedback Control of the Spatiotemporal Firing Pattern of a Basal Ganglia Microcircuit Model,”
*39*, Long Beach, CA^{th}Neural Interfaces Conference - K.Y. Kwon, K. Oweiss, (2010) “NeuroQuest: A Comprehensive tool for Large Scale Neural Data Analysis,”
*39*, Long Beach, CA^{th}Neural Interfaces Conference - S. Eldawlatly, S. Fujisawa, G. Buzsáki, K. Oweiss, (2009)
^{ }"Identifying position-specific functional networks in the rat medial prefrontal cortex,"*Society for Neuroscience Abstracts*, No192.9 - M. Aghagolzadeh , S. Eldawlatly, K. Oweiss, (2009) "The role of higher-order interactions between cortical neurons in a model of sensorimotor integration,"
*Society for Neuroscience Abstracts*, No789.11. - K. Y. Kwon, S. Eldawlatly, K. Oweiss, (2009) "NeuroQuest: A comprehensive tool for large scale neural signal processing and analysis,"
*Society for Neuroscience Abstracts*, No 790.10 - F. T. Abu-Nimeh, M. Aghagolzadeh, K. Oweiss, (2009) “Real-time, on-chip spike sorting and firing rate estimation for cortically-controlled Brain Machine Interface applications,”
*Society for Neuroscience Abstracts*, No 181.14 - M. Aghagolzadeh, K. Oweiss, (2008) “Identification and tracking of functional plasticity in motor neuronal ensembles improves the performance of population decoders,”
*Society for Neuroscience Abstracts*, No 862.19 - S. El-Dawlatly, K. Oweiss, (2008) “A two-stage paradigm for reconstructing functional neuronal circuits from spike train ensembles,”
*Society for Neuroscience Abstracts*, No 862.15 - S. Eldawlatly, R. Jin, K. Oweiss, (2008) “A Two-Stage Paradigm for Reconstructing Functional Neuronal Circuits”
*4*, Pittsburgh^{th}Int. workshop Statistical Analysis of Neural Data (SAND) - M. Shetliffe, S. El-Dawlatly, K. Oweiss, (2007) “Multiscale compressed sensing of neuronal response properties for brain machine interfaces,”
*Society for Neuroscience Abstracts*, No 770.2 - K. Oweiss, R. Jin, Y. Suhail, F. Chen(2006)
^{“}Identifying functionally interdependent neurons from multielectrode array recordings in local and global network contexts”*in Proc. 5*, pp.60-63, Reutlingen, Germany^{th}Substrate-integrated microelectrode Arrays - K. Oweiss, R. Jin, Y. Suhail, F. Chen (2006) ” Identifying neuronal assemblies with local and global connectivity with spectral clustering in scale space”
*in Proc. of 16*, Edinburgh, UK,^{th}Computational Neuroscience (CNS) - K. Oweiss, (2006) “Compressed sensing of large-scale ensemble neural activity with resource-constrained cortical implants,”
*Society for Neuroscience Abstracts,*No 13.11 - K. Oweiss, R. Jin, F. Chen, Y. Suhail, (2006) “Identification and tracking of spatial and temporal connectivity of large scale neuronal ensembles from multielectrode recorded mixtures”,
*NIH Neural Interface Workshop*, Bethesda, MD - K. Thomson, S. Chrispell, K. Oweiss, (2006) “Compressed Sensing of Large-Scale Cortical Neural Activity,”
*NIH Neural Interface Workshop*, Bethesda, MD - K. Oweiss, (2005) “A Systems Approach for Data Compression and Latency Reduction in Advanced Brain Machine Interfaces,”
*Society for Neuroscience Abstracts*, No 707.13 - K. Thomson, K. Oweiss (2005) “System and Architecture Design for Implantable Neuroprosthetic Devices,”
*NIH Neural Interface Workshop*, Bethesda, MD - Y. Suhail, K. Thomson, K. Oweiss (2005) “A Systems Approach for Data Compression and Latency Reduction in Cortically Controlled Brain Machine Interfaces,”
*NIH Neural Interface Workshop*, Bethesda, MD - K. Oweiss (2005) “Augmenting Information Channels in Cochlear Implants under Adverse Conditions,”
*NIH Neural Interface Workshop*, Bethesda, MD - Y. Suhail, K. Thomson, L. Slifka, A. Thompson, R. Jin, K. Oweiss (2004) “Multiscale Processing and Analysis of High-Density Electrode Array Neural Recordings,”
*NIH Neural Interface Workshop*, Bethesda, MD - K. Oweiss, (2002) “Non-parametric detection of unknown correlated multichannel transients with sequential and block hypothesis testing in multiresolution spaces,” 2
^{nd}*IEEE Sensor Array & Multichannel Signal Processing wshp.*,(I):375-378 - K. Oweiss, D.J. Anderson, (2000) “Neural Channel Identification of Multichannel Neural Recordings using Multiresolution Analysis,”
*Annals of the 22*^{nd}*Biomedical Engineering Society*, vol. 28 (Suppl. 1): S-116